Equation-Free multiscale computational analysis of individual-based epidemic dynamics on networks

摘要

The surveillance, analysis and ultimately the efficient long-term prediction and control of epidemic dynamics appear to be some of the major challenges nowadays. Detailed individual-based mathematical models on complex networks play an important role towards this aim. In this work, it is shown how one can exploit the Equation-Free approach and optimization methods such as Simulated Annealing to bridge detailed individual-based epidemic models with coarse-grained, system-level analysis within a pair-wise representation perspective. The proposed computational methodology provides a systematic approach for analyzing the parametric behavior of complex/multiscale epidemic simulators much more efficiently than simply simulating forward in time. It is shown how steady state and (if required) time-dependent computations, stability computations, as well as continuation and numerical bifurcation analysis can be performed in a straightforward manner. The approach is illustrated through a simple individual-based SIRS epidemic model deploying on a random regular connected graph. Using the individual-based simulator as a black box coarse-grained timestepper and with the aid of Simulated Annealing I compute the coarse-grained equilibrium bifurcation diagram and analyze the stability of the stationary states sidestepping the necessity of obtaining explicit closures at the macroscopic level.