Segmentation of neuronal nuclei based on clump splitting and a two-step binarization of images

作者:

Highlights:

• We propose a automatic segmentation algorithm for confocal microscope images.

• Algorithm based on two-steps binarization and extended clump splitting algorithm.

• Compared with state-of-the-art algorithms (Watershed, Level Set Methods).

• Validation on a set of representative images coming from the rat neocortex.

• Accurate segmentations (91–98% of properly identified cells’ nuclei).

摘要

•We propose a automatic segmentation algorithm for confocal microscope images.•Algorithm based on two-steps binarization and extended clump splitting algorithm.•Compared with state-of-the-art algorithms (Watershed, Level Set Methods).•Validation on a set of representative images coming from the rat neocortex.•Accurate segmentations (91–98% of properly identified cells’ nuclei).

论文关键词:Segmentation,Clump splitting,Concavity analysis,Overlapping objects,Binarization

论文评审过程:Available online 18 June 2013.

论文官网地址:https://doi.org/10.1016/j.eswa.2013.06.010