Parallel ant colony optimization for the training of cell signaling networks

作者：

Highlights：

• Hybrid parallel ACO adapted to pseudo-boolean optimization problem.

• Application to logic-based modeling of biochemical signaling networks.

• Experimental assessment in an HPC infrastructure.

• Comparison with other optimization methods used so far.

摘要

•Hybrid parallel ACO adapted to pseudo-boolean optimization problem.•Application to logic-based modeling of biochemical signaling networks.•Experimental assessment in an HPC infrastructure.•Comparison with other optimization methods used so far.

论文关键词：Cell signaling network,Metaheuristics,Ant colony optimization,High performance computing,MPI,OpenMP

论文评审过程：Received 23 February 2022, Revised 11 June 2022, Accepted 15 July 2022, Available online 20 July 2022, Version of Record 27 July 2022.

论文官网地址：https://doi.org/10.1016/j.eswa.2022.118199