Detecting disease genes based on semi-supervised learning and protein–protein interaction networks

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摘要

ObjectivePredicting or prioritizing the human genes that cause disease, or “disease genes”, is one of the emerging tasks in biomedicine informatics. Research on network-based approach to this problem is carried out upon the key assumption of “the network-neighbour of a disease gene is likely to cause the same or a similar disease”, and mostly employs data regarding well-known disease genes, using supervised learning methods. This work aims to find an effective method to exploit the disease gene neighbourhood and the integration of several useful omics data sources, which potentially enhance disease gene predictions.

论文关键词:Semi-supervised learning,Protein–protein interaction network,Multiple data resources integration,Disease gene neighbours,Disease-causing gene prediction

论文评审过程:Received 23 September 2009, Revised 24 May 2011, Accepted 1 September 2011, Available online 13 October 2011.

论文官网地址:https://doi.org/10.1016/j.artmed.2011.09.003