Morphological multiscale decomposition of connected regions with emphasis on cell clusters

摘要

After binarization of cells in complex cytological and histological images the segmented structures can be rather far away from a final quantification of features of single cells since cells may overlap and cluster strongly. Separating optically, partially or totally fused entities like cells is a problem which frequently cannot be solved by a watershed segmentation or a basic morphological processing of images. However, considering different morphological scales after iterative erosion gives rise to dominant markers of singular objects. Performing a reconstruction by iterative dilation yields a scale-independent decomposition of multiple disjointed cell clumps of different sizes within an image.Accordingly we developed a technique that splits cell clumps into meaningful parts. Since this method is based on the analysis of the morphological-scale space, generated by iterative erosion, it is independent on the size of cell clusters. The detection of dominant points within the eroded scales are cell-specific markers. The converse integration of markers at different scales is obtained by a successive reconstruction based on constrained dilation of the original cell shape.The advantages of this approach are the independence of cell shapes which are clumped, the consideration of holes or background intensities within objects and the robustness with regard to convergence. An important benefit is the fitting of the operation time to the size of clusters by the size of the morphological structuring element. This means, that this approach requires only one parameter. Finally, a better match of the morphological scale space approach was found and compared with the ground truth as well as the results of the watershed technique.The primary object of this paper is to highlight the algorithm and its results by using different examples from benchmark databases, self generated images that exhibit different topological features and complex configurations of cells within histological images.